BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E12SP1|AL426548
(851 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1205 1643 0.0
>3x_Contig1205
Length = 5507
Score = 1643 bits (829), Expect = 0.0
Identities = 848/852 (99%), Gaps = 2/852 (0%)
Strand = Plus / Minus
Query: 1 gatcccaaatcctgatattcccatcctgatcgcaggaaatcaattccccttggttcggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3939 gatcccaaatcctgatattcccatcctgatcgcaggaaatcaattccccttggttcggat 3880
Query: 61 gtatcgctacttcattgacaggtgcattatgcttgtaattcctttgcacagatggggacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3879 gtatcgctacttcattgacaggtgcattatgcttgtaattcctttgcacagatggggacc 3820
Query: 121 gtacatcccaaaccataatagtcccatcttcactagacgataccatccatcgattttcct 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3819 gtacatcccaaaccttaatagtcccatcttcactagacgataccatccatcgattttcct 3760
Query: 181 gttgaaatgcaatcgacgttacgttccctttatggccttcgaaagaggacaccggaattt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3759 gttgaaatgcaatcgacgttacgttccctttatggccttcgaaagaggacaccgga-ttt 3701
Query: 241 ggattattcgaccgtatatcataaagacggacgtgtaaatgaccagcagcagccaaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3700 ggattattcgaccgtatatcataaagacggacgtgtaaatgaccagcagcagccaaatat 3641
Query: 301 ttcttatcggacgtaatctctaatcgattcacttgggaatctgcatgttgaatggttcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3640 ttcttatcggacgtaatctctaatcgattcacttgggaatctgcatgttgaatggttcgt 3581
Query: 361 gaacagactccagtcaaagcttcccagaacctaattgtgtggtcgtatccagcactcgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3580 gaacagactccagtcaaagcttcccagaacctaattgtgtggtcgtatccagcactcgct 3521
Query: 421 agaataacagacatggcaatattgaagttagtctgaccgtacacaataagaaacctctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3520 agaataacagacatggcaatattgaagttagtctgaccgtacacaataagaaacctctac 3461
Query: 481 -cttgttcacaggggagaaaaagccttgaaaactcctcagattccttaagactttctttc 539
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3460 gcttgttcacaggggagaaaaagccttgaaaactcctcagattccttaagactntctttc 3401
Query: 540 atctagtatattgcatattctttatcacattaaaccataatttgtcaatattcatgattg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3400 atctagtatattgcatattctttatcacattaaaccataatttgtcaatattcatgattg 3341
Query: 600 agatataaacaacagcaattgaaacaaaagtggaggcatagagatagccacaagattgtg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3340 agatataaacaacagcaattgaaacaaaagtggaggcatagagatagccacaagattgtg 3281
Query: 660 tagtggctaatgtcattgaatgacacctgatttgcggctttgtgatgacagatttgtatt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3280 tagtggctaatgtcattgaatgacacctgatttgcggctttgtgatgacagatttgtatt 3221
Query: 720 ggtgggaaacttctatatcacgtgattgtcacatgaatctcgcgtgcttaaagcattcat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3220 ggtgggaaacttctatatcacgtgattgtcacatgaatctcgcgtgcttaaagcattcat 3161
Query: 780 gtttttttacttctagaaggttccagggtatactctgaaagaacatgatcggttgcaaca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3160 gtttttttacttctagaaggttccagggtatactctgaaagaacatgatcggttgcaaca 3101
Query: 840 gaactgaacctg 851
||||||||||||
Sbjct: 3100 gaactgaacctg 3089
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5982
Number of Sequences: 1807
Number of extensions: 5982
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 851
length of database: 10,358,551
effective HSP length: 16
effective length of query: 835
effective length of database: 10,329,639
effective search space: 8625248565
effective search space used: 8625248565
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)